Ok, So the Government begins spin control, purges Primus, Kaufman is expelled, Genocide is a casualty of this, no more Government funds.
They Find a new "Face" for Primus. However, how transparent can an Organization be? Sure they got caught red handed. Re-label & relaunch. The Gov't has put to many resources & funds into it to scrap it. The would move forward & try not to get caught again. Which would mean a lot of the seedier projects would still be there but just buried. With a thicker layer of scape goats & more solid plausible deniability. If Dr D ever found out about that his research was used for the Cyberline Process. Gods help those responsible, unless he knows and it's all part of the long game...